void |
FastaFormat.processHeader(String line,
RichSeqIOListener rsiol,
Namespace ns) |
Parse the Header information from the Fasta Description line
|
boolean |
EMBLFormat.readRichSequence(BufferedReader reader,
SymbolTokenization symParser,
RichSeqIOListener rlistener,
Namespace ns) |
Reads a sequence from the given buffered reader using the given tokenizer to parse
sequence symbols.
|
boolean |
EMBLxmlFormat.readRichSequence(BufferedReader reader,
SymbolTokenization symParser,
RichSeqIOListener rlistener,
Namespace ns) |
Reads a sequence from the given buffered reader using the given tokenizer to parse
sequence symbols.
|
boolean |
FastaFormat.readRichSequence(BufferedReader reader,
SymbolTokenization symParser,
RichSeqIOListener rsiol,
Namespace ns) |
Reads a sequence from the given buffered reader using the given tokenizer to parse
sequence symbols.
|
boolean |
GenbankFormat.readRichSequence(BufferedReader reader,
SymbolTokenization symParser,
RichSeqIOListener rlistener,
Namespace ns) |
Reads a sequence from the given buffered reader using the given tokenizer to parse
sequence symbols.
|
boolean |
INSDseqFormat.readRichSequence(BufferedReader reader,
SymbolTokenization symParser,
RichSeqIOListener rlistener,
Namespace ns) |
Reads a sequence from the given buffered reader using the given tokenizer to parse
sequence symbols.
|
boolean |
RichSequenceFormat.readRichSequence(BufferedReader reader,
SymbolTokenization symParser,
RichSeqIOListener listener,
Namespace ns) |
Reads a sequence from the given buffered reader using the given tokenizer to parse
sequence symbols.
|
boolean |
UniProtFormat.readRichSequence(BufferedReader reader,
SymbolTokenization symParser,
RichSeqIOListener rlistener,
Namespace ns) |
Reads a sequence from the given buffered reader using the given tokenizer to parse
sequence symbols.
|
boolean |
UniProtXMLFormat.readRichSequence(BufferedReader reader,
SymbolTokenization symParser,
RichSeqIOListener rlistener,
Namespace ns) |
Reads a sequence from the given buffered reader using the given tokenizer to parse
sequence symbols.
|