public class Comparison extends Object
Since 4.1.1 the methods for distance inference in forester are also used in BioJava, so this implementation of percentage of identity is not needed anymore. However, the code is maintained as the own BioJava implementation.
Constructor and Description |
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Comparison() |
public static final float PID(String seq1, String seq2)
s1
- SequenceIs2
- SequenceIpublic static final boolean isGap(char c)
c
- gap character is one of the symbols in {' ','-','.'}Copyright © 2000–2016 BioJava. All rights reserved.