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Package org.biojava.nbio.aaproperties.profeat.convertor

Set of classes that enable the conversion protein sequences into various attributes.

See: Description

Package org.biojava.nbio.aaproperties.profeat.convertor Description

Set of classes that enable the conversion protein sequences into various attributes. The seven different attributes are

Hydrophobicity (Polar, Neutral, Hydrophobicity)
Normalized van der Waals volume (Range 0 - 2.78, 2.95 - 4.0, 4.03 - 8.08)
Polarity (Value 4.9 - 6.2, 8.0 - 9.2, 10.4 - 13.0)
Polarizability (Value 0 - 1.08, 0.128 - 0.186, 0.219 - 0.409)
Charge (Positive, Neutral, Negative)
Secondary structure (Helix, Strand, Coil)
Solvent accessibility (Buried, Exposed, Intermediate)

Since:
3.0.2
Version:
2011.08.22
Author:
Koh Chuan Hock
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