Package | Description |
---|---|
org.biojava.nbio.alignment | |
org.biojava.nbio.alignment.template |
Modifier and Type | Method and Description |
---|---|
Alignments.PairInProfileScorerType |
StandardRescoreRefiner.getPairInProfileScorer() |
static Alignments.PairInProfileScorerType |
Alignments.PairInProfileScorerType.valueOf(String name)
Returns the enum constant of this type with the specified name.
|
static Alignments.PairInProfileScorerType[] |
Alignments.PairInProfileScorerType.values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
Constructor and Description |
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StandardRescoreRefiner(Alignments.PairInProfileScorerType pips,
Alignments.ProfileProfileAlignerType ppa) |
Modifier and Type | Method and Description |
---|---|
Alignments.PairInProfileScorerType |
RescoreRefiner.getPairInProfileScorer()
Returns class type of pairwise scoring subroutine.
|
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