org.biojava.nbio.core.sequence.location

Class InsdcLocations.OneOfLocation

java.lang.Object

org.biojava.nbio.core.sequence.location.template.AbstractLocation

org.biojava.nbio.core.sequence.location.InsdcLocations.OneOfLocation

All Implemented Interfaces:

Serializable, Iterable<Location>, Location, Accessioned

Enclosing class:

InsdcLocations

public static class InsdcLocations.OneOfLocation
extends AbstractLocation

Deprecated in INSDC; refers to a set of locations of which one location could be valid e.g. one-of(location, location, location). Originally used to describe split locations in alternative splicing or variations. Now these are dealt with in their own feature fields. The default location is chosen to be the first however if you think you need to work with this location you should use the sub-locations.

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from interface org.biojava.nbio.core.sequence.location.template.Location

Location.Tools

Field Summary

Fields inherited from interface org.biojava.nbio.core.sequence.location.template.Location

EMPTY

Constructor Summary

Constructors

Constructor and Description
OneOfLocation(List<Location> locations)
OneOfLocation(Location... locations)

Method Summary

Methods inherited from class org.biojava.nbio.core.sequence.location.template.AbstractLocation

assertLocation, canComplement, equals, getAccession, getEnd, getLength, getRelevantSubLocations, getRelevantSubSequence, getStart, getStrand, getSubLocations, getSubSequence, hashCode, isBetweenCompounds, isCircular, isComplex, isPartial, isPartialOn3prime, isPartialOn5prime, iterator, reverseSequence, setAccession, setBetweenCompounds, setCircular, setEnd, setPartialOn3prime, setPartialOn5prime, setStart, setStrand, setSubLocations, toString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.lang.Iterable

forEach, spliterator

Constructor Detail

OneOfLocation

public OneOfLocation(Location... locations)

OneOfLocation

public OneOfLocation(List<Location> locations)