Uses of Class
org.biojava.nbio.structure.align.helper.IndexPair

Packages that use IndexPair

Package	Description
org.biojava.nbio.structure.align.helper	Helper classes for structural alignment.
org.biojava.nbio.structure.align.pairwise	Classes for the pairwise alignment of structures.

Uses of IndexPair in org.biojava.nbio.structure.align.helper

Subclasses of IndexPair in org.biojava.nbio.structure.align.helper

Modifier and Type	Class and Description
class	AligMatEl

Uses of IndexPair in org.biojava.nbio.structure.align.pairwise

Methods in org.biojava.nbio.structure.align.pairwise that return IndexPair

Modifier and Type	Method and Description
IndexPair[]	Alignable.getPath()
IndexPair[]	StrCompAlignment.getPath()
IndexPair[]	AlternativeAlignment.getPath()

Methods in org.biojava.nbio.structure.align.pairwise with parameters of type IndexPair

Modifier and Type	Method and Description
void	Alignable.setPath(IndexPair[] path)
void	StrCompAlignment.setPath(IndexPair[] path)