org.biojava.nbio.structure.io.mmcif

Class ChemCompGroupFactory

java.lang.Object

org.biojava.nbio.structure.io.mmcif.ChemCompGroupFactory

public class ChemCompGroupFactory
extends Object

Constructor Summary

Constructors

Constructor and Description
ChemCompGroupFactory()

Method Summary

Modifier and Type	Method and Description
static ChemComp	getChemComp(String recordName)
static ChemCompProvider	getChemCompProvider()
static Group	getGroupFromChemCompDictionary(String recordName)
static String	getOneLetterCode(ChemComp cc)
static void	setChemCompProvider(ChemCompProvider provider) The new ChemCompProvider will be set in the static variable, so this provider will be used from now on until it is changed again.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ChemCompGroupFactory

public ChemCompGroupFactory()

Method Detail

getChemComp

public static ChemComp getChemComp(String recordName)

setChemCompProvider

public static void setChemCompProvider(ChemCompProvider provider)

The new ChemCompProvider will be set in the static variable, so this provider will be used from now on until it is changed again. Note that this change can have unexpected behavior of code executed afterwards.

Changing the provider does not reset the cache, so Chemical Component definitions already downloaded from previous providers will be used. To reset the cache see {@link #getCache()).

Parameters:

provider -

getChemCompProvider

public static ChemCompProvider getChemCompProvider()

getGroupFromChemCompDictionary

public static Group getGroupFromChemCompDictionary(String recordName)

getOneLetterCode

public static String getOneLetterCode(ChemComp cc)