| Package | Description | 
|---|---|
| org.biojava.nbio.structure.symmetry.internal | 
| Modifier and Type | Class and Description | 
|---|---|
class  | 
GraphComponentRefiner
The GraphRefiner transforms the self-alignment into a Graph and extracts its
 maximally connected Components. 
 | 
class  | 
SequenceFunctionRefiner
Creates a refined alignment with the CE-Symm alternative self-alignment. 
 | 
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