| Package | Description |
|---|---|
| org.biojava.nbio.structure |
Interfaces and classes for protein structure (PDB).
|
| org.biojava.nbio.structure.quaternary.io |
| Modifier and Type | Method and Description |
|---|---|
static Structure |
StructureIO.getBiologicalAssembly(String pdbId,
int biolAssemblyNr,
AtomCache cache,
BioUnitDataProvider provider) |
| Modifier and Type | Class and Description |
|---|---|
class |
MmCifBiolAssemblyProvider |
class |
PDBBioUnitDataProvider
A BioUnitDataProvider that extracts the necessary info from PDB files
|
class |
RemoteBioUnitDataProvider |
| Modifier and Type | Field and Description |
|---|---|
static Class<? extends BioUnitDataProvider> |
BioUnitDataProviderFactory.DEFAULT_PROVIDER_CLASS |
| Modifier and Type | Method and Description |
|---|---|
static BioUnitDataProvider |
BioUnitDataProviderFactory.getBioUnitDataProvider() |
| Modifier and Type | Method and Description |
|---|---|
static Class<? extends BioUnitDataProvider> |
BioUnitDataProviderFactory.getBioUnitDataProviderClass()
Get the class of providers to be instantiated.
|
| Modifier and Type | Method and Description |
|---|---|
static void |
BioUnitDataProviderFactory.setBioUnitDataProvider(Class<? extends BioUnitDataProvider> klass)
Set the type of provider to be created
|
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