Package | Description |
---|---|
org.biojava.nbio.structure.symmetry.core |
Modifier and Type | Method and Description |
---|---|
static QuatSymmetryScores |
QuatSuperpositionScorer.calcScores(Subunits subunits,
javax.vecmath.Matrix4d transformation,
List<Integer> permutation)
Returns minimum, mean, and maximum RMSD and TM-Score for two superimposed sets of subunits
TM score: Yang Zhang and Jeffrey Skolnick, PROTEINS: Structure, Function, and Bioinformatics 57:702–710 (2004)
|
QuatSymmetryScores |
Helix.getScores() |
QuatSymmetryScores |
Rotation.getScores() |
QuatSymmetryScores |
RotationGroup.getScores()
Returns QuatSymmetryScores averaged over all rotations
(except the first rotation, which is the unit operation E)
|
QuatSymmetryScores |
QuatSymmetryResults.getScores() |
QuatSymmetryScores |
HelixLayers.getScores()
Returns QuatSymmetryScores averaged over all rotations
(except the first rotation, which is the unit operation E)
|
Modifier and Type | Method and Description |
---|---|
void |
Helix.setScores(QuatSymmetryScores scores) |
void |
Rotation.setScores(QuatSymmetryScores scores) |
Copyright © 2000–2017 BioJava. All rights reserved.