Package org.biojava.nbio.aaproperties

Set of classes that responsible for providing APIs and Command Prompt access to generate some basic physico-chemical properties of protein sequences.

See: Description

Interface Summary

Interface	Description
IPeptideProperties	An interface to generate some basic physico-chemical properties of protein sequences.

Class Summary

Class	Description
AminoAcidProperties	This class provides the protein properties at the level of individual amino acids.
CommandPrompt
Constraints	This class is used to support the implementation of properties stated in IPeptideProperties.
PeptideProperties	This is an adaptor class which enable the ease of generating protein properties.
PeptidePropertiesImpl	This class contains the actual implementation of IPeptideProperties and is wrapped around by PeptideProperties for ease of use.
Utils	This is a utility class that contains utility methods which will facilitates the coding of other methods

Enum Summary

Enum	Description
CommandPrompt.PropertyName
PeptideProperties.SingleLetterAACode	Enumeration of 20 standard amino acid code

Package org.biojava.nbio.aaproperties Description

Set of classes that responsible for providing APIs and Command Prompt access to generate some basic physico-chemical properties of protein sequences.

Since:

3.0.2

Version:

2011.08.22

Author:

Koh Chuan Hock