org.biojava.nbio.core.sequence

Class ExonComparator

java.lang.Object

org.biojava.nbio.core.sequence.ExonComparator

All Implemented Interfaces:

Serializable, Comparator<ExonSequence>

public class ExonComparator
extends Object
implements Comparator<ExonSequence>, Serializable

Sort Exon where it is a little confusing if exons shoud always be ordered left to right where a negative stranded gene should go the other direction. Need to think about this?

Author:

Scooter Willis

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
ExonComparator()

Method Summary

Modifier and Type	Method and Description
int	compare(ExonSequence o1, ExonSequence o2)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

comparing, comparing, comparingDouble, comparingInt, comparingLong, equals, naturalOrder, nullsFirst, nullsLast, reversed, reverseOrder, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

ExonComparator

public ExonComparator()

Method Detail

compare

public int compare(ExonSequence o1,
                   ExonSequence o2)

Specified by:

compare in interface Comparator<ExonSequence>