org.biojava.nbio.structure.align.client

Class PdbPair

java.lang.Object

org.biojava.nbio.structure.align.client.PdbPair

All Implemented Interfaces:

Comparable<PdbPair>

public class PdbPair
extends Object
implements Comparable<PdbPair>

A pair for structure alignment

Author:

Andreas Prlic name1 is always < name2

Constructor Summary

Constructors

Constructor and Description
PdbPair(String name1, String name2)
PdbPair(StructureName name1, StructureName name2)

Method Summary

Modifier and Type	Method and Description
int	compareTo(PdbPair o)
boolean	equals(Object obj)
String	getChainId1()
String	getChainId2()
String	getName1()
String	getName2()
String	getPDBCode1()
String	getPDBCode2()
PdbPair	getReverse()
int	hashCode()
void	setName1(String name1)
void	setName2(String name2)
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

PdbPair

public PdbPair(String name1,
               String name2)

PdbPair

public PdbPair(StructureName name1,
               StructureName name2)

Method Detail

getName1

public String getName1()

setName1

public void setName1(String name1)

getName2

public String getName2()

setName2

public void setName2(String name2)

toString

public String toString()

Overrides:

toString in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

equals

public boolean equals(Object obj)

Overrides:

equals in class Object

compareTo

public int compareTo(PdbPair o)

Specified by:

compareTo in interface Comparable<PdbPair>

getPDBCode1

public String getPDBCode1()
                   throws StructureException

Throws:

StructureException

getPDBCode2

public String getPDBCode2()
                   throws StructureException

Throws:

StructureException

getChainId1

public String getChainId1()

getChainId2

public String getChainId2()

getReverse

public PdbPair getReverse()