CathCategory (biojava 5.0.0 API)

java.lang.Object
- java.lang.Enum<CathCategory>
- - org.biojava.nbio.structure.cath.CathCategory

All Implemented Interfaces:

Serializable, Comparable<CathCategory>
```
public enum CathCategory
extends Enum<CathCategory>
```
The categories found within CATH. The CATH node types are: 'C' (class), 'A' (architecture), 'T' (topology), 'H' (homologous superfamily), 'S' (sequence family, S35), 'O' (orthologous sequence family, S60), 'L' ("like" sequence family, S95), 'I' (identical, S100) and 'D' (domain, S100 count).

Author:

Daniel Asarnow

Enum Constant Summary

Enum Constants
Enum Constant and Description
`Architecture`
`Class`
`DomainCounter`
`Homology`
`IdenticalSequenceFamily`
`LikeSequenceFamily`
`OrthologousSequenceFamily`
`SequenceFamily`
`Topolgy`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`static CathCategory`	`fromCathCode(String code)`
`static CathCategory`	`fromString(String type)`
`String`	`toString()`
`static CathCategory`	`valueOf(String name)` Returns the enum constant of this type with the specified name.
`static CathCategory[]`	`values()` Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum
clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, valueOf

Methods inherited from class java.lang.Object
getClass, notify, notifyAll, wait, wait, wait

- Enum Constant Detail
  - Class
```
public static final CathCategory Class
```
  - Architecture
```
public static final CathCategory Architecture
```
  - Topolgy
```
public static final CathCategory Topolgy
```
  - Homology
```
public static final CathCategory Homology
```
  - SequenceFamily
```
public static final CathCategory SequenceFamily
```
  - OrthologousSequenceFamily
```
public static final CathCategory OrthologousSequenceFamily
```
  - LikeSequenceFamily
```
public static final CathCategory LikeSequenceFamily
```
  - IdenticalSequenceFamily
```
public static final CathCategory IdenticalSequenceFamily
```
  - DomainCounter
```
public static final CathCategory DomainCounter
```
- Method Detail
  - values
```
public static CathCategory[] values()
```
    Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:
```
for (CathCategory c : CathCategory.values())
    System.out.println(c);
```
    Returns:
    
    an array containing the constants of this enum type, in the order they are declared
  - valueOf
```
public static CathCategory valueOf(String name)
```
    Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)
    
    Parameters:
    
    name - the name of the enum constant to be returned.
    
    Returns:
    
    the enum constant with the specified name
    
    Throws:
    
    IllegalArgumentException - if this enum type has no constant with the specified name
    
    NullPointerException - if the argument is null
  - fromString
```
public static CathCategory fromString(String type)
```
  - toString
```
public String toString()
```
    Overrides:
    
    toString in class Enum<CathCategory>
  - fromCathCode
```
public static CathCategory fromCathCode(String code)
```

Enum CathCategory

Enum Constant Summary

Method Summary

Methods inherited from class java.lang.Enum

Methods inherited from class java.lang.Object

Enum Constant Detail

Class

Architecture

Topolgy

Homology

SequenceFamily

OrthologousSequenceFamily

LikeSequenceFamily

IdenticalSequenceFamily

DomainCounter

Method Detail

values

valueOf

fromString

toString

fromCathCode