org.biojava.nbio.structure.symmetry.gui

Class SymmetryCalc

java.lang.Object

org.biojava.nbio.structure.symmetry.gui.SymmetryCalc

All Implemented Interfaces:

Runnable, AlignmentCalculationRunnable

public class SymmetryCalc
extends Object
implements AlignmentCalculationRunnable

Calculates a symmetry analysis and displays the results. Linked to the SymmetryGUI. Does not generalize, uses CeSymm class directly to allow for the symmetry axis recovery.

Since:

4.2.0

Author:

Aleix Lafita

Constructor Summary

Constructors

Constructor and Description
SymmetryCalc(SymmetryGui p, Structure s) Requests for a structure to analyze.

Method Summary

Modifier and Type	Method and Description
void	cleanup()
void	interrupt()
void	run()
void	setNrCPUs(int useNrCPUs)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SymmetryCalc

public SymmetryCalc(SymmetryGui p,
                    Structure s)

Requests for a structure to analyze.

Method Detail

run

public void run()

Specified by:

run in interface Runnable

interrupt

public void interrupt()

Specified by:

interrupt in interface AlignmentCalculationRunnable

cleanup

public void cleanup()

Specified by:

cleanup in interface AlignmentCalculationRunnable

setNrCPUs

public void setNrCPUs(int useNrCPUs)

Specified by:

setNrCPUs in interface AlignmentCalculationRunnable