org.biojava.nbio.ws.alignment.qblast

Enum BlastProgramEnum

java.lang.Object

java.lang.Enum<BlastProgramEnum>

org.biojava.nbio.ws.alignment.qblast.BlastProgramEnum

All Implemented Interfaces:

Serializable, Comparable<BlastProgramEnum>

public enum BlastProgramEnum
extends Enum<BlastProgramEnum>

Enum representing available blast programs.

Values are as used by QBlast URL API.

Author:

Gediminas Rimsa

Enum Constant Summary

Enum Constants

Enum Constant and Description
blastn
blastp
blastx
megablast
tblastn
tblastx

Method Summary

Modifier and Type	Method and Description
static BlastProgramEnum	valueOf(String name) Returns the enum constant of this type with the specified name.
static BlastProgramEnum[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

blastn

public static final BlastProgramEnum blastn

blastp

public static final BlastProgramEnum blastp

blastx

public static final BlastProgramEnum blastx

megablast

public static final BlastProgramEnum megablast

tblastn

public static final BlastProgramEnum tblastn

tblastx

public static final BlastProgramEnum tblastx

Method Detail

values

public static BlastProgramEnum[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (BlastProgramEnum c : BlastProgramEnum.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static BlastProgramEnum valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null