Uses of Class
org.biojava.nbio.aaproperties.profeat.IProfeatProperties.DISTRIBUTION
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Packages that use IProfeatProperties.DISTRIBUTION Package Description org.biojava.nbio.aaproperties.profeat Set of classes that responsible for providing APIs access to generate some PROFEAT properties of protein sequences. -
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Uses of IProfeatProperties.DISTRIBUTION in org.biojava.nbio.aaproperties.profeat
Methods in org.biojava.nbio.aaproperties.profeat that return IProfeatProperties.DISTRIBUTION Modifier and Type Method Description static IProfeatProperties.DISTRIBUTION
IProfeatProperties.DISTRIBUTION. valueOf(String name)
Returns the enum constant of this type with the specified name.static IProfeatProperties.DISTRIBUTION[]
IProfeatProperties.DISTRIBUTION. values()
Returns an array containing the constants of this enum type, in the order they are declared.Methods in org.biojava.nbio.aaproperties.profeat with parameters of type IProfeatProperties.DISTRIBUTION Modifier and Type Method Description double
IProfeatProperties. getDistributionPosition(ProteinSequence sequence, IProfeatProperties.ATTRIBUTE attribute, IProfeatProperties.GROUPING group, IProfeatProperties.DISTRIBUTION distribution)
Computes and return the position with respect to the sequence where the given distribution of the grouping can be found.
Example: "1111122222"
For the above example,
position of the GROUPING.GROUP1 && DISTRIBUTION.FIRST = 0/10 (because the first occurrence of '1' is at position 0)
position of the GROUPING.GROUP1 && DISTRIBUTION.ALL = 4/10 (because all occurrences of '1' happens on and before position 4)static double
ProfeatProperties. getDistributionPosition(String sequence, IProfeatProperties.ATTRIBUTE attribute, IProfeatProperties.GROUPING group, IProfeatProperties.DISTRIBUTION distribution)
static double
ProfeatProperties. getDistributionPosition(ProteinSequence sequence, IProfeatProperties.ATTRIBUTE attribute, IProfeatProperties.GROUPING group, IProfeatProperties.DISTRIBUTION distribution)
An adaptor method which computes and return the position with respect to the sequence where the given distribution of the grouping can be found.
Example: "1111122222"
For the above example,
position of the GROUPING.GROUP1 && DISTRIBUTION.FIRST = 0/10 (because the first occurrence of '1' is at position 0)
position of the GROUPING.GROUP1 && DISTRIBUTION.ALL = 4/10 (because all occurrences of '1' happens on and before position 4)double
ProfeatPropertiesImpl. getDistributionPosition(ProteinSequence sequence, IProfeatProperties.ATTRIBUTE attribute, IProfeatProperties.GROUPING group, IProfeatProperties.DISTRIBUTION distribution)
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