- java.lang.Object
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- org.biojava.nbio.alignment.template.CallablePairwiseSequenceAligner<S,C>
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- Type Parameters:
S
- eachSequence
of the alignment pair is of type SC
- each element of anAlignedSequence
is aCompound
of type C
- All Implemented Interfaces:
Callable<SequencePair<S,C>>
public class CallablePairwiseSequenceAligner<S extends Sequence<C>,C extends Compound> extends Object implements Callable<SequencePair<S,C>>
Implements a concurrency wrapper for aPairwiseSequenceAligner
.- Author:
- Mark Chapman
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Constructor Summary
Constructors Constructor Description CallablePairwiseSequenceAligner(PairwiseSequenceAligner<S,C> psa)
Creates a pairwise sequence alignment task for simplified parallel execution.
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Constructor Detail
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CallablePairwiseSequenceAligner
public CallablePairwiseSequenceAligner(PairwiseSequenceAligner<S,C> psa)
Creates a pairwise sequence alignment task for simplified parallel execution.- Parameters:
psa
- already initialized pairwise sequence aligner
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