Class RNACompoundSet
- java.lang.Object
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- org.biojava.nbio.core.sequence.template.AbstractCompoundSet<C>
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- org.biojava.nbio.core.sequence.template.AbstractNucleotideCompoundSet<NucleotideCompound>
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- org.biojava.nbio.core.sequence.compound.RNACompoundSet
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- All Implemented Interfaces:
CompoundSet<NucleotideCompound>
- Direct Known Subclasses:
AmbiguityRNACompoundSet
public class RNACompoundSet extends AbstractNucleotideCompoundSet<NucleotideCompound>
- Author:
- Andy Yates
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Constructor Summary
Constructors Constructor Description RNACompoundSet()
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description static RNACompoundSet
getRNACompoundSet()
NucleotideCompound
newNucleotideCompound(String base, String complement, String... equivalents)
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Methods inherited from class org.biojava.nbio.core.sequence.template.AbstractNucleotideCompoundSet
addNucleotideCompound, calculateIndirectAmbiguities, getAmbiguity, isComplementable
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Methods inherited from class org.biojava.nbio.core.sequence.template.AbstractCompoundSet
addCompound, addCompound, addCompound, addEquivalent, compoundsEqual, compoundsEquivalent, equals, getAllCompounds, getCompoundForString, getEquivalentCompounds, getMaxSingleCompoundStringLength, getStringForCompound, hasCompound, hashCode, isCompoundStringLengthEqual, isValidSequence
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Constructor Detail
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RNACompoundSet
public RNACompoundSet()
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Method Detail
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getRNACompoundSet
public static RNACompoundSet getRNACompoundSet()
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newNucleotideCompound
public NucleotideCompound newNucleotideCompound(String base, String complement, String... equivalents)
- Specified by:
newNucleotideCompound
in classAbstractNucleotideCompoundSet<NucleotideCompound>
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