Class PlainFastaHeaderParser<S extends AbstractSequence<C>,​C extends Compound>

  • All Implemented Interfaces:
    SequenceHeaderParserInterface<S,​C>

    public class PlainFastaHeaderParser<S extends AbstractSequence<C>,​C extends Compound>
    extends Object
    implements SequenceHeaderParserInterface<S,​C>
    The plain fasta header takes everything in the header as a single entity. It is useful for non-standard header formats that don't follow a single rule.
    If the user has a custom header with local data that is kept constant all over the data then they can create their own implementation of a FastaHeaderParserInterface
    Since:
    3.0.6
    Author:
    Amr AL-Hossary