Uses of Interface
org.biojava.nbio.structure.align.ce.UserArgumentProcessor
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Packages that use UserArgumentProcessor Package Description org.biojava.nbio.structure.align.ce Classes related to the implementation of the CE alignment algorithm, here called jCE.org.biojava.nbio.structure.align.fatcat Classes related to the implementation of the FATCAT alignment algorithm, here called jFATCAT.org.biojava.nbio.structure.align.seq -
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Uses of UserArgumentProcessor in org.biojava.nbio.structure.align.ce
Classes in org.biojava.nbio.structure.align.ce that implement UserArgumentProcessor Modifier and Type Class Description class
AbstractUserArgumentProcessor
Base class for a new structure alignment CLI.class
CeCPUserArgumentProcessor
class
CeSideChainUserArgumentProcessor
class
CeUserArgumentProcessor
process the arguments from command line -
Uses of UserArgumentProcessor in org.biojava.nbio.structure.align.fatcat
Classes in org.biojava.nbio.structure.align.fatcat that implement UserArgumentProcessor Modifier and Type Class Description class
FatCatUserArgumentProcessor
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Uses of UserArgumentProcessor in org.biojava.nbio.structure.align.seq
Classes in org.biojava.nbio.structure.align.seq that implement UserArgumentProcessor Modifier and Type Class Description class
SmithWatermanUserArgumentProcessor
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