Uses of Class
org.biojava.nbio.structure.align.util.ConfigurationException
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Packages that use ConfigurationException Package Description org.biojava.nbio.structure.align.ce Classes related to the implementation of the CE alignment algorithm, here called jCE.org.biojava.nbio.structure.align.fatcat Classes related to the implementation of the FATCAT alignment algorithm, here called jFATCAT.org.biojava.nbio.structure.align.seq org.biojava.nbio.structure.align.util -
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Uses of ConfigurationException in org.biojava.nbio.structure.align.ce
Methods in org.biojava.nbio.structure.align.ce that throw ConfigurationException Modifier and Type Method Description static void
CeCPMain. main(String[] args)
static void
CeSideChainMain. main(String[] args)
void
UserArgumentProcessor. process(String[] argv)
Process user arguments that have been provided from the command line -
Uses of ConfigurationException in org.biojava.nbio.structure.align.fatcat
Methods in org.biojava.nbio.structure.align.fatcat that throw ConfigurationException Modifier and Type Method Description static void
FatCat. main(String[] argv)
See demo/FatCatDemo.java for an example how to run. -
Uses of ConfigurationException in org.biojava.nbio.structure.align.seq
Methods in org.biojava.nbio.structure.align.seq that throw ConfigurationException Modifier and Type Method Description static void
SmithWaterman3Daligner. main(String[] args)
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Uses of ConfigurationException in org.biojava.nbio.structure.align.util
Methods in org.biojava.nbio.structure.align.util that throw ConfigurationException Modifier and Type Method Description static String[]
CliTools. configureBean(Object bean, String[] args)
Configure a JavaBean based on a set of command line arguments.
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