Uses of Interface
org.biojava.nbio.structure.io.StructureProvider
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Packages that use StructureProvider Package Description org.biojava.nbio.structure.io Input and Output of Structures -
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Uses of StructureProvider in org.biojava.nbio.structure.io
Subinterfaces of StructureProvider in org.biojava.nbio.structure.io Modifier and Type Interface Description interface
StructureIOFile
StructureIOFile extends StructureProvider with methods specific to parsing files from the filesystem.Classes in org.biojava.nbio.structure.io that implement StructureProvider Modifier and Type Class Description class
LocalPDBDirectory
Superclass for classes which download and interact with the PDB's FTP server, specificallyPDBFileReader
andMMCIFFileReader
.class
MMCIFFileReader
How to parse an mmCif file:class
MMTFFileReader
A class to read MMTF files and cache them locally.class
PDBFileReader
The wrapper class for parsing a PDB file.class
SandboxStyleStructureProvider
The "Sandbox" style of organizing files is to have a directory structure like below, i.e. the files are organized into directory with two characters, based on the two middle characters of a PDB ID directory of PDB ID several files that are available for this PDB ID
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