Uses of Class
org.biojava.nbio.structure.io.mmcif.model.PdbxStructAssembly
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Packages that use PdbxStructAssembly Package Description org.biojava.nbio.structure.io.mmcif Input and Output of mmcif files.org.biojava.nbio.structure.io.mmcif.model Datamodel objects used for processing mmcif files.org.biojava.nbio.structure.quaternary -
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Uses of PdbxStructAssembly in org.biojava.nbio.structure.io.mmcif
Methods in org.biojava.nbio.structure.io.mmcif that return types with arguments of type PdbxStructAssembly Modifier and Type Method Description List<PdbxStructAssembly>
SimpleMMcifConsumer. getStructAssemblies()
Methods in org.biojava.nbio.structure.io.mmcif with parameters of type PdbxStructAssembly Modifier and Type Method Description void
ChemCompConsumer. newPdbxStrucAssembly(PdbxStructAssembly strucAssembly)
void
MetalBondConsumer. newPdbxStrucAssembly(PdbxStructAssembly strucAssembly)
void
MMcifConsumer. newPdbxStrucAssembly(PdbxStructAssembly strucAssembly)
void
SimpleMMcifConsumer. newPdbxStrucAssembly(PdbxStructAssembly strucAssembly)
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Uses of PdbxStructAssembly in org.biojava.nbio.structure.io.mmcif.model
Methods in org.biojava.nbio.structure.io.mmcif.model that return types with arguments of type PdbxStructAssembly Modifier and Type Method Description List<PdbxStructAssembly>
PdbxStructAssemblyXMLContainer. getPdbxStructAssemblies()
Method parameters in org.biojava.nbio.structure.io.mmcif.model with type arguments of type PdbxStructAssembly Modifier and Type Method Description void
PdbxStructAssemblyXMLContainer. setPdbxStructAssemblies(List<PdbxStructAssembly> d)
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Uses of PdbxStructAssembly in org.biojava.nbio.structure.quaternary
Methods in org.biojava.nbio.structure.quaternary with parameters of type PdbxStructAssembly Modifier and Type Method Description ArrayList<BiologicalAssemblyTransformation>
BiologicalAssemblyBuilder. getBioUnitTransformationList(PdbxStructAssembly psa, List<PdbxStructAssemblyGen> psags, List<PdbxStructOperList> operators)
Returns a list of transformation matrices for the generation of a macromolecular assembly for the specified assembly Id.
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