Class SiftsChainToUniprotMapping


  • public class SiftsChainToUniprotMapping
    extends Object
    A mapping between UniProt entries and PDB chains. For example
     SiftsChainToUniprot sifts = SiftsChainToUniprot.load();
     SiftsChainEntry entry1 = sifts.getByUniProtId("P04585");
     System.out.println(entry1.getPdbId() + "." + entry1.getChainName()); // 1hiv.A
     System.out.println(entry1.getPdbStart() + "-" + entry1.getPdbStop()); // 1-99
     SiftsChainEntry entry2 = sifts.getByChainId("1hiv", "A");
     System.out.println(entry1.equals(entry2)); // true
     
    See SIFTS project documentation: https://www.ebi.ac.uk/pdbe/docs/sifts/
    Since:
    3.0.7
    Author:
    dmyersturnbull
    See Also:
    SiftsChainEntry