Uses of Package
org.biojava.nbio.structure.scop
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Packages that use org.biojava.nbio.structure.scop Package Description org.biojava.nbio.structure.align.client This package deals with the server communication for auto-downloading pre-calculated alignments.org.biojava.nbio.structure.align.util org.biojava.nbio.structure.gui.util org.biojava.nbio.structure.scop Parsers and API for SCOP, Structural Classification of Proteins.org.biojava.nbio.structure.scop.server -
Classes in org.biojava.nbio.structure.scop used by org.biojava.nbio.structure.align.client Class Description ScopDatabase General API how to interact with SCOPScopDomain Container for the information for a domain. -
Classes in org.biojava.nbio.structure.scop used by org.biojava.nbio.structure.align.util Class Description ScopDatabase General API how to interact with SCOPScopDomain Container for the information for a domain. -
Classes in org.biojava.nbio.structure.scop used by org.biojava.nbio.structure.gui.util Class Description ScopDatabase General API how to interact with SCOP -
Classes in org.biojava.nbio.structure.scop used by org.biojava.nbio.structure.scop Class Description Astral.AstralSet An ASTRAL sequence-identity cutoff with an identifier such as:LocalScopDatabase Classes which implement ScopDatabase in a way which allows them to serve queries without accessing the internet should implement this interface instead.ScopCategory The various categories provided by SCOP.ScopDatabase General API how to interact with SCOPScopDescription Contains data from dir.des.scop.txt_1.75ScopDomain Container for the information for a domain.ScopInstallation This class provides access to the SCOP protein structure classification.ScopIOException Indicates that an I/O error occurred with SCOP lazy initialization.ScopMirror Helper class to store paths to the four SCOP files The string "%s" is replaced with the version number.ScopNode -
Classes in org.biojava.nbio.structure.scop used by org.biojava.nbio.structure.scop.server Class Description ScopDescription Contains data from dir.des.scop.txt_1.75ScopDomain Container for the information for a domain.ScopNode