Package | Description |
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org.biojava.nbio.core.sequence.io | |
org.biojava.nbio.core.sequence.transcription |
Modifier and Type | Class and Description |
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static class |
IUPACParser.IUPACTable
Holds the concept of a codon table from the IUPAC format
|
Modifier and Type | Method and Description |
---|---|
Table |
TranscriptionEngine.getTable() |
Modifier and Type | Method and Description |
---|---|
TranscriptionEngine.Builder |
TranscriptionEngine.Builder.table(Table table) |
Constructor and Description |
---|
RNAToAminoAcidTranslator(SequenceCreatorInterface<AminoAcidCompound> creator,
CompoundSet<NucleotideCompound> nucleotides,
CompoundSet<Table.Codon> codons,
CompoundSet<AminoAcidCompound> aminoAcids,
Table table,
boolean trimStops,
boolean initMetOnly,
boolean translateNCodons,
boolean stopAtStopCodons,
boolean waitForStartCodon) |
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