org.biojava.nbio.genome.util

Class ProteinMappingTools

java.lang.Object

org.biojava.nbio.genome.util.ProteinMappingTools

public class ProteinMappingTools
extends Object

Constructor Summary

Constructors

Constructor and Description
ProteinMappingTools()

Method Summary

Modifier and Type	Method and Description
static ProteinSequence	convertDNAtoProteinSequence(DNASequence dnaSequence) Converts the DNA sequence to protein sequence.
static ProteinSequence	convertDNAtoProteinSequence(String dnaSequence) Converts the DNA sequence to protein sequence.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ProteinMappingTools

public ProteinMappingTools()

Method Detail

convertDNAtoProteinSequence

public static ProteinSequence convertDNAtoProteinSequence(String dnaSequence)
                                                   throws CompoundNotFoundException

Converts the DNA sequence to protein sequence.

Parameters:

dnaSequence - the DNA sequence

Returns:

the protein sequence

Throws:

CompoundNotFoundException

convertDNAtoProteinSequence

public static ProteinSequence convertDNAtoProteinSequence(DNASequence dnaSequence)
                                                   throws CompoundNotFoundException

Converts the DNA sequence to protein sequence.

Parameters:

dnaSequence - the DNA sequence

Returns:

the protein sequence

Throws:

CompoundNotFoundException