| Class | Description |
|---|---|
| AFPChainCoordManager | |
| AligPanel |
A JPanel that can display an AFPChain in a nice way and interact with Jmol.
|
| AligPanelMouseMotionListener | |
| MultipleAlignmentCoordManager |
Generalization of the Coodinate Manager to include an arbitrary number of
sequences (lines) for MultipleAlignment visualization.
|
| MultipleAligPanel |
A JPanel that can display the sequence alignment of a
MultipleAlignment in a nice way and interact with Jmol by
selecting the aligned atoms of the sequence selection. |
| MultipleAligPanelMouseMotionListener |
Mouse Motion Listener for the
MultipleAligPanel,
which provides methods to obtain positions of the mouse
and connect them to the sequence alignment positions using
the information in MultipleAlignmentCoordManager. |
| MultipleStatusDisplay |
This class provides information of the selected positions in the
MultipleAligPanel. |
| StatusDisplay |
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