Hierarchy For Package org.biojava.nbio.structure.io

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • org.biojava.nbio.structure.io.BondMaker
  • org.biojava.nbio.structure.io.CAConverter
  • org.biojava.nbio.structure.io.ChargeAdder
  • org.biojava.nbio.structure.io.EntityFinder
  • org.biojava.nbio.structure.io.FastaAFPChainConverter
  • org.biojava.nbio.structure.io.FastaStructureParser
  • org.biojava.nbio.structure.io.FileConvert
  • org.biojava.nbio.structure.io.FileParsingParameters (implements java.io.Serializable)
  • org.biojava.nbio.structure.io.GroupToSDF
  • org.biojava.nbio.structure.io.LocalPDBDirectory (implements org.biojava.nbio.structure.io.StructureIOFile)
    • org.biojava.nbio.structure.io.BcifFileReader
    • org.biojava.nbio.structure.io.CifFileReader
    • org.biojava.nbio.structure.io.MMCIFFileReader
    • org.biojava.nbio.structure.io.MMTFFileReader
    • org.biojava.nbio.structure.io.PDBFileReader
  • org.biojava.nbio.structure.io.PDBBioAssemblyParser
  • org.biojava.nbio.structure.io.PDBFileParser
  • org.biojava.nbio.structure.io.SandboxStyleStructureProvider (implements org.biojava.nbio.structure.io.StructureProvider)
  • org.biojava.nbio.structure.io.SeqRes2AtomAligner
  • org.biojava.nbio.structure.io.SSBondImpl (implements java.lang.Cloneable, org.biojava.nbio.structure.PDBRecord)
  • org.biojava.nbio.structure.io.StructureSequenceMatcher
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • org.biojava.nbio.structure.io.PDBParseException

Interface Hierarchy

• org.biojava.nbio.structure.io.StructureProvider
  • org.biojava.nbio.structure.io.StructureIOFile

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • org.biojava.nbio.structure.io.LocalPDBDirectory.FetchBehavior
    • org.biojava.nbio.structure.io.LocalPDBDirectory.ObsoleteBehavior