| Package | Description |
|---|---|
| org.biojava.nbio.structure |
Interfaces and classes for protein structure (PDB).
|
| org.biojava.nbio.structure.contact | |
| org.biojava.nbio.structure.io.mmcif |
Input and Output of mmcif files.
|
| org.biojava.nbio.structure.io.mmtf | |
| org.biojava.nbio.structure.xtal | |
| org.biojava.nbio.structure.xtal.io |
| Class and Description |
|---|
| CrystalCell
A crystal cell's parameters.
|
| SpaceGroup
A crystallographic space group.
|
| Class and Description |
|---|
| CrystalTransform
Representation of a transformation in a crystal:
- a transformation id (each of the transformations in a space group, 0 to m)
- a crystal translation
The transformation matrix in crystal basis is stored, representing the basic
transformation together with the crystal translation.
|
| Class and Description |
|---|
| CrystalCell
A crystal cell's parameters.
|
| SpaceGroup
A crystallographic space group.
|
| Class and Description |
|---|
| SpaceGroup
A crystallographic space group.
|
| Class and Description |
|---|
| BravaisLattice
An enum to represent the 7 Bravais lattices
|
| CrystalCell
A crystal cell's parameters.
|
| CrystalTransform
Representation of a transformation in a crystal:
- a transformation id (each of the transformations in a space group, 0 to m)
- a crystal translation
The transformation matrix in crystal basis is stored, representing the basic
transformation together with the crystal translation.
|
| SpaceGroup
A crystallographic space group.
|
| TransformType |
| UnitCellBoundingBox
A class to contain the BoundingBoxes of all polymeric molecules in a full unit cell.
|
| Class and Description |
|---|
| SpaceGroup
A crystallographic space group.
|
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