GenericInsdcHeaderFormat (biojava 6.0.0 API)

java.lang.Object
- org.biojava.nbio.core.sequence.io.GenericInsdcHeaderFormat<S,C>

Direct Known Subclasses:: GenericGenbankHeaderFormat

public class GenericInsdcHeaderFormat<S extends AbstractSequence<C>,C extends Compound>
extends Object

Author:: mckeee1

Field Summary

Fields
Modifier and Type	Field	Description
`protected static int`	`MAX_WIDTH`
`protected static int`	`QUALIFIER_INDENT`
`protected static String`	`QUALIFIER_INDENT_STR`
`protected static String`	`QUALIFIER_INDENT_TMP`

Constructor Summary

Constructors
Constructor Description

GenericInsdcHeaderFormat()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`protected ArrayList<String>`	`_split_multi_line(String text, int max_len)`	Returns a list of strings.
`protected String`	`_write_feature(FeatureInterface<AbstractSequence<C>,C> feature, int record_length)`	Write a single SeqFeature object to features table.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Field Detail
  - MAX_WIDTH
```
protected static final int MAX_WIDTH
```
    See Also:
    
    Constant Field Values
  - QUALIFIER_INDENT
```
protected static final int QUALIFIER_INDENT
```
    See Also:
    
    Constant Field Values
  - QUALIFIER_INDENT_STR
```
protected static final String QUALIFIER_INDENT_STR
```
    See Also:
    
    Constant Field Values
  - QUALIFIER_INDENT_TMP
```
protected static final String QUALIFIER_INDENT_TMP
```
    See Also:
    
    Constant Field Values
- Constructor Detail
  - GenericInsdcHeaderFormat
```
public GenericInsdcHeaderFormat()
```
- Method Detail
  - _write_feature
```
protected String _write_feature(FeatureInterface<AbstractSequence<C>,C> feature,
                                int record_length)
```
    Write a single SeqFeature object to features table.
    
    Parameters:
    
    feature -
    
    record_length -
  - _split_multi_line
```
protected ArrayList<String> _split_multi_line(String text,
                                              int max_len)
```
    Returns a list of strings. Any single words which are too long get returned as a whole line (e.g. URLs) without an exception or warning.
    
    Parameters:
    
    text -
    
    max_len -