AlignedPosition (biojava 6.0.0 API)

java.lang.Object
- org.biojava.nbio.structure.gui.util.AlignedPosition

public class AlignedPosition
extends Object

Field Summary

Fields
Modifier and Type	Field	Description
`static int`	`EQUIVALENT`	flag if this position is equivalent
`static int`	`NOT_ALIGNED`	they can be shown in the same column (for a compact display) , but they are not structurally equivalent

Constructor Summary

Constructors
Constructor Description

AlignedPosition()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`int`	`getEquivalent()`
`int`	`getPos(int position)`
`int`	`getPos1()`
`int`	`getPos2()`
`void`	`setEquivalent(int equivalent)`
`void`	`setPos(int position, int pos)`
`void`	`setPos1(int pos1)`
`void`	`setPos2(int pos2)`
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail
- EQUIVALENT
```
public static final int EQUIVALENT
```
  flag if this position is equivalent
  
  See Also:
  
  Constant Field Values
- NOT_ALIGNED
```
public static final int NOT_ALIGNED
```
  they can be shown in the same column (for a compact display) , but they are not structurally equivalent
  
  See Also:
  
  Constant Field Values

Constructor Detail
- AlignedPosition
```
public AlignedPosition()
```

Method Detail

getPos
```
public int getPos(int position)
```

setPos

public void setPos(int position,
                   int pos)

toString
```
public String toString()
```
Overrides:

toString in class Object

getPos1
```
public int getPos1()
```

setPos1
```
public void setPos1(int pos1)
```

getPos2
```
public int getPos2()
```

setPos2
```
public void setPos2(int pos2)
```

getEquivalent
```
public int getEquivalent()
```

setEquivalent

public void setEquivalent(int equivalent)