Enum AlignerHelper.Last
- java.lang.Object
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- java.lang.Enum<AlignerHelper.Last>
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- org.biojava.nbio.alignment.routines.AlignerHelper.Last
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- All Implemented Interfaces:
Serializable
,Comparable<AlignerHelper.Last>
- Enclosing class:
- AlignerHelper
public static enum AlignerHelper.Last extends Enum<AlignerHelper.Last>
Define a traceback pointer for the three edit operations: substitution (match/replacement of a query compound with a target compound), deletion (removal of a query compound leaving a gap in the target sequence), and insertion (addition of a target compound opening a gap in the query sequence).
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Enum Constant Summary
Enum Constants Enum Constant Description DELETION
INSERTION
SUBSTITUTION
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Method Summary
All Methods Static Methods Concrete Methods Modifier and Type Method Description static AlignerHelper.Last
valueOf(String name)
Returns the enum constant of this type with the specified name.static AlignerHelper.Last[]
values()
Returns an array containing the constants of this enum type, in the order they are declared.
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Enum Constant Detail
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SUBSTITUTION
public static final AlignerHelper.Last SUBSTITUTION
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DELETION
public static final AlignerHelper.Last DELETION
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INSERTION
public static final AlignerHelper.Last INSERTION
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Method Detail
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values
public static AlignerHelper.Last[] values()
Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:for (AlignerHelper.Last c : AlignerHelper.Last.values()) System.out.println(c);
- Returns:
- an array containing the constants of this enum type, in the order they are declared
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valueOf
public static AlignerHelper.Last valueOf(String name)
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)- Parameters:
name
- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
IllegalArgumentException
- if this enum type has no constant with the specified nameNullPointerException
- if the argument is null
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