Uses of Package
org.biojava.nbio.structure.symmetry.core
-
Classes in org.biojava.nbio.structure.symmetry.core used by org.biojava.nbio.structure.cluster Class Description Stoichiometry A utility object that describes Stoichiometry (composition of a protein assembly), determined via clustering procedureSubunitClusterer, and implements human-readable representation using various strategies. -
Classes in org.biojava.nbio.structure.symmetry.core used by org.biojava.nbio.structure.symmetry.axis Class Description HelixLayers QuatSymmetryResults Holds the results of quaternary symmetry perception obtained withQuatSymmetryDetector.QuatSymmetrySubunits A bean to represent information about the set ofSubunits being considered for symmetry detection.RotationGroup -
Classes in org.biojava.nbio.structure.symmetry.core used by org.biojava.nbio.structure.symmetry.core Class Description Helix HelixLayers QuatSymmetryParameters The QuatSymmetryParameters specify the options used for the detection of quaternary symmetry in structures using theQuatSymmetryDetector.QuatSymmetryResults Holds the results of quaternary symmetry perception obtained withQuatSymmetryDetector.QuatSymmetryScores QuatSymmetrySolver QuatSymmetrySubunits A bean to represent information about the set ofSubunits being considered for symmetry detection.Rotation RotationGroup Stoichiometry A utility object that describes Stoichiometry (composition of a protein assembly), determined via clustering procedureSubunitClusterer, and implements human-readable representation using various strategies.Stoichiometry.StringOverflowStrategy What to do when the number ofSubunitClusterexceeds the length of the alphabet.SymmetryPerceptionMethod Method used for symmetry perception in theQuatSymmetryDetector. -
Classes in org.biojava.nbio.structure.symmetry.core used by org.biojava.nbio.structure.symmetry.jmolScript Class Description RotationGroup -
Classes in org.biojava.nbio.structure.symmetry.core used by org.biojava.nbio.structure.symmetry.utils Class Description QuatSymmetryResults Holds the results of quaternary symmetry perception obtained withQuatSymmetryDetector.