Package org.biojava.nbio.core.sequence.compound

Class AmbiguityRNACompoundSet

java.lang.Object

org.biojava.nbio.core.sequence.template.AbstractCompoundSet<NucleotideCompound>

org.biojava.nbio.core.sequence.template.AbstractNucleotideCompoundSet<NucleotideCompound>

org.biojava.nbio.core.sequence.compound.RNACompoundSet

org.biojava.nbio.core.sequence.compound.AmbiguityRNACompoundSet

All Implemented Interfaces:

CompoundSet<NucleotideCompound>

public class AmbiguityRNACompoundSet
extends RNACompoundSet

Author:

Andy Yates

Constructor Summary

Constructors

Constructor	Description
AmbiguityRNACompoundSet()

Method Summary

Modifier and Type	Method	Description
static AmbiguityRNACompoundSet	getRNACompoundSet()

Methods inherited from class org.biojava.nbio.core.sequence.compound.RNACompoundSet

newNucleotideCompound

Methods inherited from class org.biojava.nbio.core.sequence.template.AbstractNucleotideCompoundSet

addNucleotideCompound, calculateIndirectAmbiguities, getAmbiguity, isComplementable

Methods inherited from class org.biojava.nbio.core.sequence.template.AbstractCompoundSet

addCompound, addCompound, addCompound, addEquivalent, compoundsEqual, compoundsEquivalent, equals, getAllCompounds, getCompoundForString, getEquivalentCompounds, getMaxSingleCompoundStringLength, getStringForCompound, hasCompound, hashCode, isCompoundStringLengthEqual, isValidSequence

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Constructor Details

AmbiguityRNACompoundSet

public AmbiguityRNACompoundSet()

Method Details

getRNACompoundSet

public static AmbiguityRNACompoundSet getRNACompoundSet()