Package org.biojava.nbio.structure.contact

Class StructureInterfaceCluster

java.lang.Object

org.biojava.nbio.structure.contact.StructureInterfaceCluster

All Implemented Interfaces:

Serializable

public class StructureInterfaceCluster
extends Object
implements Serializable

See Also:

• Serialized Form

Constructor Summary

Constructors

Constructor	Description
StructureInterfaceCluster()

Method Summary

Modifier and Type	Method	Description
boolean	addMember(StructureInterface interf)
double	getAverageScore()	Returns the average similarity score between all pairs of members in the cluster
int	getId()
List<StructureInterface>	getMembers()
double	getTotalArea()	Return the average buried surface area for this interface cluster
void	setAverageScore(double averageScore)
void	setId(int id)
void	setMembers(List<StructureInterface> members)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

StructureInterfaceCluster

public StructureInterfaceCluster()

Method Details

getMembers

public List<StructureInterface> getMembers()

setMembers

public void setMembers(List<StructureInterface> members)

addMember

public boolean addMember(StructureInterface interf)

getId

public int getId()

setId

public void setId(int id)

getTotalArea

public double getTotalArea()

Return the average buried surface area for this interface cluster

Returns:

getAverageScore

public double getAverageScore()

Returns the average similarity score between all pairs of members in the cluster

Returns:

setAverageScore

public void setAverageScore(double averageScore)