Uses of Package
org.biojava.nbio.structure.contact
Packages that use org.biojava.nbio.structure.contact
Package
Description
Interfaces and classes for protein structure (PDB).
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Classes in org.biojava.nbio.structure.contact used by org.biojava.nbio.structureClassDescriptionA set of atom-atom contacts to hold the results of intra and inter-chain contact calculations
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Classes in org.biojava.nbio.structure.contact used by org.biojava.nbio.structure.align.util
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Classes in org.biojava.nbio.structure.contact used by org.biojava.nbio.structure.basepairs
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Classes in org.biojava.nbio.structure.contact used by org.biojava.nbio.structure.contactClassDescriptionA pair of atoms that are in contactA set of atom-atom contacts to hold the results of intra and inter-chain contact calculationsA bounding box for short cutting some geometrical calculations.A simple class to store contacts in the form of pairs of indices and a distance associated to them.A grid to be used for calculating atom contacts through a spatial hashing algorithm.A grid cell to be used in contact calculation via spatial hashing algorithm.A pair of residues that are in contactA set of residue-residue contacts.A Pair of objects.An interface between 2 molecules (2 sets of atoms).A list of interfaces between 2 molecules (2 sets of atoms)
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Classes in org.biojava.nbio.structure.contact used by org.biojava.nbio.structure.xtalClassDescriptionA bounding box for short cutting some geometrical calculations.A list of interfaces between 2 molecules (2 sets of atoms)