Package org.biojava.nbio.ws.hmmer

Class HmmerDomain

java.lang.Object

org.biojava.nbio.ws.hmmer.HmmerDomain

All Implemented Interfaces:

Serializable, Comparable<HmmerDomain>

public class HmmerDomain
extends Object
implements Comparable<HmmerDomain>, Serializable

Provides the details of a domain hit

Since:

3.0.3

Author:

Andreas Prlic

See Also:

• Serialized Form

Constructor Summary

Constructors

Constructor	Description
HmmerDomain()

Method Summary

Modifier and Type	Method	Description
int	compareTo(HmmerDomain o)
Integer	getAliLenth()
Float	getEvalue()
String	getHmmAcc()
String	getHmmDesc()
Integer	getHmmFrom()
String	getHmmName()
Integer	getHmmTo()
Integer	getSimCount()
Integer	getSqFrom()
Integer	getSqTo()
void	setAliLenth(Integer aliLenth)
void	setEvalue(Float evalue)
void	setHmmAcc(String hmmAcc)
void	setHmmDesc(String hmmDesc)
void	setHmmFrom(Integer hmmFrom)
void	setHmmName(String hmmName)
void	setHmmTo(Integer hmmTo)
void	setSimCount(Integer simCount)
void	setSqFrom(Integer sqFrom)
void	setSqTo(Integer sqTo)
String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

HmmerDomain

public HmmerDomain()

Method Details

getEvalue

public Float getEvalue()

setEvalue

public void setEvalue(Float evalue)

getSqFrom

public Integer getSqFrom()

setSqFrom

public void setSqFrom(Integer sqFrom)

getSqTo

public Integer getSqTo()

setSqTo

public void setSqTo(Integer sqTo)

getAliLenth

public Integer getAliLenth()

setAliLenth

public void setAliLenth(Integer aliLenth)

getSimCount

public Integer getSimCount()

setSimCount

public void setSimCount(Integer simCount)

getHmmFrom

public Integer getHmmFrom()

setHmmFrom

public void setHmmFrom(Integer hmmFrom)

getHmmTo

public Integer getHmmTo()

setHmmTo

public void setHmmTo(Integer hmmTo)

getHmmName

public String getHmmName()

setHmmName

public void setHmmName(String hmmName)

getHmmDesc

public String getHmmDesc()

setHmmDesc

public void setHmmDesc(String hmmDesc)

getHmmAcc

public String getHmmAcc()

setHmmAcc

public void setHmmAcc(String hmmAcc)

toString

public String toString()

Overrides:

toString in class Object

compareTo

public int compareTo(HmmerDomain o)

Specified by:

compareTo in interface Comparable<HmmerDomain>