BioJava:ToDo

What needs starting?

  • Conversion of cookbook and tutorials to reflect 1.4 (and/or BioJavax) conventions - requires someone with in-depth knowledge of the complete workings of BioJava
  • Consolidate cookbook, tutorials and BJX docbook into a single HowTo - time-consuming, might as well just write a book!
  • Related sites eg bioperl, biopython etc - easy, could use interwiki

Whats in progress?

  • Choosing a logo!
  • CookBook (/wiki/BioJava in Anger) Portuguese version –Guedes 06:50, 12 April 2006 (EDT)

Whats done already?

  • About BioJava
  • Getting BioJava
  • Thanks
  • Getting Started (Done –Foisys 12:49, 6 February 2006 (EST))
  • CookBook (/wiki/BioJava in Anger English version) - Done –Guedes 14:34, 8 February 2006 (EST)
  • CookBook (/wiki/BioJava in Anger French Version) - Done –Foisys 15:00, 14 February 2006 (EST)
  • JavaDoc 1.3 - how? link back to old? Links to old established –Mark 12:13, 6 February 2006 (EST)
  • JavaDoc 1.4 - how? link back to old? Links to old established –Mark 12:13, 6 February 2006 (EST)
  • Hackers Guide - Done –Foisys 16:37, 6 February 2006 (EST)
  • Download 1.3 - Done – Martin 12:18, 7 February 2006 (EST)
  • Download 1.4 - Done – Martin 12:18, 7 February 2006 (EST)
  • CVS access - Unnecessary – links to CVS and WebCVS are already in -- [Rholland](User:Rholland "wikilink") 14:51, 8 February 2006 (SGT)
  • WebCVS - Unnecessary – links to CVS and WebCVS are already in -- [Rholland](User:Rholland "wikilink") 14:51, 8 February 2006 (SGT)
  • Mailing list pages –Mark 07:17, 23 February 2006 (EST)
  • Participants –Mark 07:17, 23 February 2006 (EST)
  • Tutorial - laborious but straightforward, some parts are in need of updating and/or are no longer relevant (Formatting is done – Martin 21:02, 12 February 2006 (EST))
  • BioJavaX docbook need converting to Wiki - quite hard (done)

Inspiration

If you don’t know the best way to do it take a look at the bioperl home page for inspiration.

Also try looking at the bioperl style guide for hints on making links etc