BioJava:CookBook:AAPROP:instabilityindex

How is Instability Index computed?

The instability index provides an estimate of the stability of proteins in a test tube. It is computed using the following formulae.

    where L is the length of sequence and DIWV is the instability weight value for the dipeptide starting in position i.

The DIWV value for dipeptides are based on this paper. For more information, please refer to this.