Package org.biojava.nbio.protmod.structure

Class StructureGroup

java.lang.Object

org.biojava.nbio.protmod.structure.StructureGroup

All Implemented Interfaces:

Comparable<StructureGroup>

public class StructureGroup
extends Object
implements Comparable<StructureGroup>

Information of a group (residue or ligand) involved in a modification.

Since:

3.0

Author:

Jianjiong Gao

Constructor Summary

Constructors

Constructor	Description
StructureGroup()
StructureGroup(ResidueNumber resNum, String pdbName, boolean isAminoAcid)

Method Summary

Modifier and Type	Method	Description
int	compareTo(StructureGroup aGroup)
boolean	equals(Object obj)
String	getChainId()
Character	getInsCode()
String	getPDBName()
ResidueNumber	getPDBResidueNumber()
int	getResidueNumber()
int	hashCode()
boolean	isAminoAcid()
void	setChainId(String chainId)
void	setInsCode(Character c)
void	setIsAminoAcid(boolean isAminoAcid)
void	setPDBName(String pdbName)
void	setPDBResidueNumber(ResidueNumber resNum)
void	setResidueNumber(int seqNr)
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Details

StructureGroup

public StructureGroup()

StructureGroup

public StructureGroup(ResidueNumber resNum,
 String pdbName,
 boolean isAminoAcid)

Method Details

getPDBResidueNumber

public ResidueNumber getPDBResidueNumber()

setPDBResidueNumber

public void setPDBResidueNumber(ResidueNumber resNum)

getChainId

public String getChainId()

setChainId

public void setChainId(String chainId)

getResidueNumber

public int getResidueNumber()

setResidueNumber

public void setResidueNumber(int seqNr)

getInsCode

public Character getInsCode()

setInsCode

public void setInsCode(Character c)

getPDBName

public String getPDBName()

setPDBName

public void setPDBName(String pdbName)

setIsAminoAcid

public void setIsAminoAcid(boolean isAminoAcid)

isAminoAcid

public boolean isAminoAcid()

equals

public boolean equals(Object obj)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object

compareTo

public int compareTo(StructureGroup aGroup)

Specified by:

compareTo in interface Comparable<StructureGroup>