Uses of Class
org.biojava.nbio.protmod.structure.StructureGroup
Packages that use StructureGroup
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Uses of StructureGroup in org.biojava.nbio.protmod.io
Methods in org.biojava.nbio.protmod.io that return StructureGroupMethods in org.biojava.nbio.protmod.io with parameters of type StructureGroupModifier and TypeMethodDescriptionstatic void
StructureGroupXMLConverter.toXML
(StructureGroup group, PrettyXMLWriter xml) -
Uses of StructureGroup in org.biojava.nbio.protmod.structure
Methods in org.biojava.nbio.protmod.structure that return StructureGroupModifier and TypeMethodDescriptionStructureAtom.getGroup()
static StructureGroup
StructureUtil.getStructureGroup
(Group group, boolean isAminoAcid) Methods in org.biojava.nbio.protmod.structure that return types with arguments of type StructureGroupModifier and TypeMethodDescriptionModifiedCompound.getGroups()
ModifiedCompound.getGroups
(boolean isAminoAcid) ModifiedCompoundImpl.getGroups()
ModifiedCompoundImpl.getGroups
(boolean isAminoAcid) ProteinModificationIdentifier.getUnidentifiableModifiedResidues()
Methods in org.biojava.nbio.protmod.structure with parameters of type StructureGroupMethod parameters in org.biojava.nbio.protmod.structure with type arguments of type StructureGroupModifier and TypeMethodDescriptionvoid
ModifiedCompound.setGroups
(Set<StructureGroup> groups) void
ModifiedCompoundImpl.setGroups
(Set<StructureGroup> groups) Constructors in org.biojava.nbio.protmod.structure with parameters of type StructureGroupModifierConstructorDescriptionModifiedCompoundImpl
(ProteinModification modification, StructureGroup modifiedResidue) Create a ModifiedCompoundImpl that has only one involved component.StructureAtom
(StructureGroup group, String atomName)