AngleOrderDetectorPlus 
Guesses an order of rotational symmetry from the angle.

CeSymm 
Identify the symmetries in a structure by running an alignment of the
structure against itself disabling the diagonal of the identity alignment.

CeSymmIterative 
Iterative version of CeSymm that aims at identifying all symmetry axis of a
structure.

CESymmParameters 
Provides parameters to CeSymm .

CeSymmResult 
This Class stores all the relevant information of an internal symmetry result
obtained with CeSymm.

GraphComponentOrderDetector 
The GraphOrderDetector transforms the selfalignment into a Graph and
extracts its maximally connected Components.

GraphComponentRefiner 
The GraphRefiner transforms the selfalignment into a Graph and extracts its
maximally connected Components.

ResidueGroup 
A ResidueGroup is a set of residues that are part of a maximally connected
component of the selfAlignment Graph in symmetry analysis.

SequenceFunctionOrderDetector 
Calls Spencer's method for determining order.

SequenceFunctionRefiner 
Creates a refined alignment with the CESymm alternative selfalignment.

SymmetryAxes 
Data Structure that stores all the symmetry axis that describe
the symmetry of a structure.

SymmetryAxes.Axis 
Represents an axis of symmetry

SymmOptimizer 
Optimizes a symmetry alignment by a Monte Carlo score optimization of the
repeat multiple alignment.
