Uses of Class
org.biojava.bibliography.BibRefException

Packages that use BibRefException

Package	Description
org.biojava.bibliography	The data structures and interfaces included in this package define an interoperable framework for bibliographic searches.

Uses of BibRefException in org.biojava.bibliography

Methods in org.biojava.bibliography that throw BibRefException

Modifier and Type	Method and Description
void	BibRefSupport.connect() It creates a connection to an object providing the supporting utilities, or/and it makes all necessary initialization steps needed for further communication.
void	BibRefQuery.connect() It creates a connection to a bibliographic repository, or/and it makes all necessary initialization steps needed for further communication.
void	BibRefQuery.connect(byte[] collectionId) It creates a connection to a bibliographic repository, or/and it makes all necessary initialization steps needed for further communication, and it makes the collection described by collectionId the current collection.
void	BibRefQuery.destroy() It frees all resources related to this query collection.
BibRefQuery	BibRefQuery.find(String[] keywords, String[] attrs, Hashtable properties) The easiest direct method for querying a repository.
BibRefQuery	BibRefQuery.findByAuthor(BiblioProvider author, Hashtable properties) This is a convenient method for a common query.
BibRef	BibRefQuery.findById(String bibRefId) This is a convenient method returning just one citation.
BibRef	BibRefQuery.findById(String bibRefId, String[] onlyAttrs) This is a convenient method returning just one citation, perhaps with a limited number of attributes.
BibRef[]	BibRefQuery.getAllBibRefs() It returns all citations from the current collection as a (possibly big) array.
BibRef[]	BibRefQuery.getAllBibRefs(String[] onlyAttrs) It returns all citations from the current collection as a (possibly big) array, perhaps with a limited number of attributes.
InputStream	BibRefQuery.getAllBibRefsAsXML() It returns all citations from the current collection as an XML stream.
String[]	BibRefQuery.getAllIDs() A convenient method returning just identifiers of all current citations.
String	BibRefQuery.getBibRefAsXML(BibRef bibRef) A convenient utility method converting a given citation to its XML representation.
int	BibRefQuery.getBibRefCount() It returns the number of citations in the current collection.
Enumeration	BibRefQuery.getBibRefs() It returns an enumeration of all citations from the current collection.
Enumeration	BibRefQuery.getBibRefs(String[] onlyAttrs) It returns an enumeration of all citations from the current collection, perhaps with a limited number of attributes.
Enumeration	BibRefQuery.getBibRefsAsXML() It returns an enumeration of all citations from the current collection.
BiblioCriterion[]	BibRefSupport.getSupportedCriteria() It returns all supported searching and sorting criteria for the whole bibliographic repository.
BiblioCriterion[]	BibRefSupport.getSupportedCriteria(String repositorySubset) It returns all supported searching and sorting criteria in the given repository subset.
CandyVocabulary	BibRefSupport.getSupportedValues(String resourceType, String attrName) It returns a controlled vocabulary containing all possible values of the attribute given in attrName in the context given in resourceType.
CandyFinder	BibRefSupport.getVocabularyFinder() It returns an object representing a central place where all controlled vocabularies can be received from and shared by all users.
BibRefQuery	BibRefQuery.query(String query, Hashtable properties) It queries the current collection using a query language.
BibRefQuery	BibRefQuery.sort(String[] orderedBy, Hashtable properties) It sorts the current collection and returns another collection which is a sorted copy of the current collection.
BibRefQuery	BibRefSupport.union(BibRefQuery[] collections, Hashtable properties) It merges all given collections together.