| Package | Description | 
|---|---|
| org.biojava.bio.alignment | 
 
Classes to generate and describe sequence alignments. 
 | 
| org.biojava.bio.program.abi | 
 ABI Trace Handling. 
 | 
| Modifier and Type | Method and Description | 
|---|---|
void | 
SimpleAlignmentElement.setLoc(Location nLoc)  | 
void | 
AlignmentElement.setLoc(Location nLoc)  | 
| Modifier and Type | Method and Description | 
|---|---|
SymbolList | 
ABITrace.getSequence()
Returns the original programatically determined (unedited) sequence as a  
SymbolList. | 
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