Class SQLUnigeneFactory

  • All Implemented Interfaces:

    public class SQLUnigeneFactory
    extends Object
    implements UnigeneFactory

    An implementatoin of UnigeneFactory that manages it's data in an SQL database.

    This class is for developers and power-users. Usually you will not use this class directly, but rather use UnigeneTools.loadDatabase() with a jdbc URL.

    This class will store unigene data in a relational database with a schema defined by the resource src/org/biojava/bio/program/unigene/createUnigene.sql and currently only realy supports mysql. To import data to a newly created database, repeatedly call addCluster() on the UnigeneDB you get back.

    Matthew Pocock