Package org.biojava.bio.search
Interface SearchBuilder
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- All Superinterfaces:
SearchContentHandler
- All Known Implementing Classes:
BlastLikeSearchBuilder
public interface SearchBuilder extends SearchContentHandler
TheSearchBuilder
interface is to be used by objects which accumulate state via aSearchContentHandler
and then construct aSeqSimilaritySearchResult
object.- Since:
- 1.1
- Author:
- Keith James
- See Also:
SearchContentHandler
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description SeqSimilaritySearchResult
makeSearchResult()
ThemakeSearchResult
method returns aSeqSimilaritySearchResult
instance created from accumulated data.-
Methods inherited from interface org.biojava.bio.search.SearchContentHandler
addHitProperty, addSearchProperty, addSubHitProperty, endHeader, endHit, endSearch, endSubHit, getMoreSearches, setDatabaseID, setMoreSearches, setQueryID, startHeader, startHit, startSearch, startSubHit
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Method Detail
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makeSearchResult
SeqSimilaritySearchResult makeSearchResult() throws BioException
ThemakeSearchResult
method returns aSeqSimilaritySearchResult
instance created from accumulated data.- Returns:
- a
SeqSimilaritySearchResult
. - Throws:
BioException
- if an error occurs.
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