Package org.biojava.bio.seq.db.biosql
Class BioSQLSequenceDBProvider
- java.lang.Object
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- org.biojava.bio.seq.db.biosql.BioSQLSequenceDBProvider
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- All Implemented Interfaces:
SequenceDBProvider
public class BioSQLSequenceDBProvider extends Object implements SequenceDBProvider
Deprecated.Use hibernate and org.biojavax.bio.db.*- Author:
- Thomas Down
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Constructor Summary
Constructors Constructor Description BioSQLSequenceDBProvider()Deprecated.
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Method Summary
All Methods Instance Methods Concrete Methods Deprecated Methods Modifier and Type Method Description StringgetName()Deprecated.The name of this provider.SequenceDBLitegetSequenceDB(Map config)Deprecated.Get a sequence database.
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Constructor Detail
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BioSQLSequenceDBProvider
public BioSQLSequenceDBProvider()
Deprecated.
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Method Detail
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getName
public String getName()
Deprecated.Description copied from interface:SequenceDBProviderThe name of this provider.- Specified by:
getNamein interfaceSequenceDBProvider- Returns:
- the provider's name.
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getSequenceDB
public SequenceDBLite getSequenceDB(Map config) throws RegistryException, BioException
Deprecated.Description copied from interface:SequenceDBProviderGet a sequence database.- Specified by:
getSequenceDBin interfaceSequenceDBProvider- Parameters:
config- a Map containing key-value pairs identifying the database to resolve.- Returns:
- a SequenceDBLite that was resolved.
- Throws:
RegistryExceptionBioException
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