| CharactersBlock |
Represents Nexus characters blocks.
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| CharactersBlockBuilder |
Builds Nexus characters blocks.
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| CharactersBlockListener |
Listens to events that represent Nexus characters blocks.
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| CharactersBlockParser |
Parses Nexus characters blocks.
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| DataBlockListener |
Listens to events that represent Nexus data blocks.
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| DistancesBlockListener |
Listens to events that represent Nexus distances blocks.
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| NexusBlock |
Represents a Nexus block.
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| NexusBlock.Abstract |
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| NexusBlockBuilder |
Builds a Nexus block from listening to events.
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| NexusBlockBuilder.Abstract |
This abstract version knows how to build and add comments.
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| NexusBlockListener |
Listens to events from NexusBlockParser objects to create objects.
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| NexusBlockParser |
Parses Nexus blocks.
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| NexusBlockParser.Abstract |
All block parsers should derive from this abstract parser.
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| NexusComment |
Represents a Nexus comment, possibly nested.
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| NexusFile |
Represents Nexus files.
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| NexusFileListener |
Listens to events fired by the Nexus parser.
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| NexusFileListener.Abstract |
Example abstract implementation which all others should extend.
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| NexusObject |
Represents general info about nexus objects.
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| TaxaBlockListener |
Listens to events that represent Nexus taxa blocks.
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| TreesBlock.NewickTreeString |
A simple representation of a Newick tree as a single string.
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| TreesBlockListener |
Listens to events that represent Nexus trees blocks.
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